ydfR

168

unknown

Locus: BSU_05530

Molecular weight: 25.02 kDa

Isoelectric point: 10.37

Protein length: 225 aa

Gene length: 678 bp

Function: unknown

Product: unknown

Essential: no

Synonyms: ydfR

Genomic Context

Hide small RNAsZoom:

List of homologs in different organisms, belongs to COG2323 (Galperin et al., 2021)

Gene

Coordinates: 600,229  600,906

The protein

Protein family

• UPF0702 family (according to UniProt)

Structure

• P96696 (AlphaFold)

Localization

• cell membrane (according to UniProt)

Expression and Regulation

Operons

• Genes: ydfR

  Description: PubMed

  Regulation

  • expressed during sporulation in the forespore (SigG) PubMed
  • strongly expressed during oligotrophic growth PubMed

  Sigma factors

  • SigG: sigma factor, PubMed, in sigG regulon

Biological materials

Mutant

• MGNA-C155 (ydfR::erm), available at the NBRP B. subtilis, Japan
• BKE05530 (ydfR::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATTCTGTCCTGAACCGAAC,  downstream forward: _UP4_TAACAAAAGGCGCTTGTGGC
• BKK05530 (ydfR::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATTCTGTCCTGAACCGAAC,  downstream forward: _UP4_TAACAAAAGGCGCTTGTGGC

References

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