ydeS

168

similar to transcriptional regulator (TetR family)

Locus: BSU_05320

Molecular weight: 22.00 kDa

Isoelectric point: 7.18

Protein length: 198 aa

Gene length: 597 bp

Function: unknown

Product: unknown

Essential: no

Synonyms: ydeS

Genomic Context

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Categories containing this gene/protein

Information processing, Regulation of gene expression, Transcription factors and their control, Transcription factor/ other/ based on similarity

List of homologs in different organisms, belongs to COG1309 (Galperin et al., 2021)

Gene

Coordinates: 578,337  578,933

The protein

Protein family

TetR family

Domains

HTH tetR-type domain (aa 11-71) (according to UniProt)

Structure

2FQ4 (PDB) (from B. cereus, 76% identity)
P96676 (AlphaFold)

Expression and Regulation

Operons

Genes: ydeS-ydzO

Description: PubMed

Biological materials

Mutant

MGNA-C140 (ydeS::erm), available at the NBRP B. subtilis, Japan
BKE05320 (ydeS::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CACATAAATCATTCCTTCCC,  downstream forward: _UP4_TAGCTGATAAGAACTGCAAA
BKK05320 (ydeS::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CACATAAATCATTCCTTCCC,  downstream forward: _UP4_TAGCTGATAAGAACTGCAAA

References

Reviews

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