ydeI

168

binds to DNA lesions, may be involved in DNA repair

Locus: BSU_05210

Molecular weight: 22.91 kDa

Isoelectric point: 7.17

Protein length: 197 aa

Gene length: 594 bp

Function: unknown

Product: unknown

Essential: no

E.C.: null

Synonyms: ydeI

Genomic Context

Hide small RNAsZoom:

List of homologs in different organisms, belongs to COG4430 (Galperin et al., 2021)

Gene

Coordinates: 568,345 → 568,938

The protein

Catalyzed reaction/ biological activity

• binds to abasic and RNA base DNA lesions PubMed

Structure

• P96666 (AlphaFold)

Expression and Regulation

Operons

• Genes: ydeI

  Description: PubMed

Biological materials

Mutant

• MGNA-C132 (ydeI::erm), available at the NBRP B. subtilis, Japan
• BKE05210 (ΔydeI::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATGAAGGAATTCCCCTCTT,  downstream forward: _UP4_TAGGCACGCCAAGGTTCAGG
• BKK05210 (ΔydeI::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATGAAGGAATTCCCCTCTT,  downstream forward: _UP4_TAGGCACGCCAAGGTTCAGG

References

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