Difference between revisions of "YqxD"

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=== Additional information===
 
=== Additional information===
 
 
 
  
 
=The protein=
 
=The protein=
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* '''Kinetic information:'''
 
* '''Kinetic information:'''
  
* '''Domains:'''  
+
* '''[[Domains]]:'''  
  
 
* '''Modification:'''
 
* '''Modification:'''
  
* '''Cofactor(s):'''
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* '''[[Cofactors]]:'''
  
 
* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yqxD_2603373_2603867_-1 yqxD] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yqxD_2603373_2603867_-1 yqxD] {{PubMed|22383849}}
  
* '''Sigma factor:''' [[SigA]] {{PubMed|3298998}}, [[SigH]] {{PubMed|3127379}}
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* '''[[Sigma factor]]:''' [[SigA]] {{PubMed|3298998}}, [[SigH]] {{PubMed|3127379}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 20:01, 16 February 2014

  • Description: unknown

Gene name yqxD
Synonyms yqfM
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yqxD
MW, pI 22 kDa, 7.172
Gene length, protein length 588 bp, 196 aa
Immediate neighbours antE, yqfL
Sequences Protein DNA DNA_with_flanks
Genetic context
YqxD context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YqxD expression.png















Categories containing this gene/protein

proteins of unknown function

This gene is a member of the following regulons

SigH regulon

The gene

Basic information

  • Locus tag: BSU25230

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: UPF0178 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Modification:
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

C T Liao, Y D Wen, W H Wang, B Y Chang
Identification and characterization of a stress-responsive promoter in the macromolecular synthesis operon of Bacillus subtilis.
Mol Microbiol: 1999, 33(2);377-88
[PubMed:10411753] [WorldCat.org] [DOI] (P p)

H L Carter, L F Wang, R H Doi, C P Moran
rpoD operon promoter used by sigma H-RNA polymerase in Bacillus subtilis.
J Bacteriol: 1988, 170(4);1617-21
[PubMed:3127379] [WorldCat.org] [DOI] (P p)

L F Wang, R H Doi
Promoter switching during development and the termination site of the sigma 43 operon of Bacillus subtilis.
Mol Gen Genet: 1987, 207(1);114-9
[PubMed:3298998] [WorldCat.org] [DOI] (P p)