Difference between revisions of "YjbL"

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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 366 bp, 122 aa  
 
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 366 bp, 122 aa  
 
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|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yjbK]]'', ''[[yjbM]]''
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yjbK]]'', ''[[sasB]]''
 
|-
 
|-
 
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU11590 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU11590 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU11590 DNA_with_flanks]
 
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU11590 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU11590 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU11590 DNA_with_flanks]
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=== Additional information===
 
=== Additional information===
 
 
 
  
 
=The protein=
 
=The protein=
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* '''Kinetic information:'''
 
* '''Kinetic information:'''
  
* '''Domains:'''  
+
* '''[[Domains]]:'''  
  
 
* '''Modification:'''
 
* '''Modification:'''
  
* '''Cofactor(s):'''
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* '''[[Cofactors]]:'''
  
 
* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
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=Expression and regulation=
 
=Expression and regulation=
* '''Operon:''' ''[[yjbL]]-[[yjbM]]-[[nadF]]-[[yjbO]]'' {{PubMed|18067544}}
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* '''Operon:''' ''[[yjbL]]-[[sasB]]-[[nadF]]-[[yjbO]]'' {{PubMed|18067544}}
  
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yjbL_1236609_1236977_1 yjbL] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yjbL_1236609_1236977_1 yjbL] {{PubMed|22383849}}
  
* '''Sigma factor:'''  
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* '''[[Sigma factor]]:'''  
  
 
* '''Regulation:''' expressed during exponential growth
 
* '''Regulation:''' expressed during exponential growth

Revision as of 16:00, 6 February 2014

  • Description: unknown

Gene name yjbL
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yjbL
MW, pI 13 kDa, 4.323
Gene length, protein length 366 bp, 122 aa
Immediate neighbours yjbK, sasB
Sequences Protein DNA DNA_with_flanks
Genetic context
YjbL context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YjbL expression.png















Categories containing this gene/protein

proteins of unknown function

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU11590

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Modification:
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation: expressed during exponential growth
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Hideaki Nanamiya, Koji Kasai, Akira Nozawa, Choong-Soo Yun, Takakuni Narisawa, Kana Murakami, Yousuke Natori, Fujio Kawamura, Yuzuru Tozawa
Identification and functional analysis of novel (p)ppGpp synthetase genes in Bacillus subtilis.
Mol Microbiol: 2008, 67(2);291-304
[PubMed:18067544] [WorldCat.org] [DOI] (P p)