Difference between revisions of "NrnA"

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=References=
 
=References=
'''Additional publications:''' {{PubMed|22102036}}
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<pubmed>17586819,9387221 , 16479537, 19429620  19553197 21087930 22102036</pubmed>
<pubmed>17586819,9387221 , 16479537, 19429620  19553197 21087930</pubmed>
 
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 12:26, 30 January 2014

Description: oligoribonuclease (nanoRNase), 3',5'-bisphosphate nucleotidase

Gene name nrnA
Synonyms ytqI
Essential no
Product oligoribonuclease (nanoRNase), 3',5'-bisphosphate nucleotidase
Function degradation of RNA oligonucleotides,
MW, pI 34 kDa, 4.668
Gene length, protein length 939 bp, 313 aa
Immediate neighbours ytzJ, ytpI
Sequences Protein DNA DNA_with_flanks
Genetic context
YtqI context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
NrnA expression.png
























Categories containing this gene/protein

Rnases

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU29250

Phenotypes of a mutant

The mutant requires cysteine PubMed

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
    • Adenosine 3',5'-bisphosphate + H2O = adenosine 5'-phosphate + phosphate (according to Swiss-Prot)
    • oligoribonuclease (nanoRNAse), 3',5'-bisphosphate nucleotidase PubMed
    • hydrolyze oligo(deoxy)ribonucleotides in a 5'-3' direction PubMed
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References