Difference between revisions of "SndB"

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=== Additional information===
 
=== Additional information===
 
 
 
  
 
=The protein=
 
=The protein=
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* '''Protein family:''' peptidase M20 family (according to Swiss-Prot)
 
* '''Protein family:''' peptidase M20 family (according to Swiss-Prot)
  
* '''Paralogous protein(s):''' [[SndA]], [[SndC]], [[YkuR]]
+
* '''Paralogous protein(s):''' [[SndA]], [[SndC]], [[DapI]]
  
 
=== Extended information on the protein ===
 
=== Extended information on the protein ===
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* '''Kinetic information:'''
 
* '''Kinetic information:'''
  
* '''Domains:'''  
+
* '''[[Domains]]:'''  
  
 
* '''Modification:'''
 
* '''Modification:'''
  
* '''Cofactor(s):'''
+
* '''[[Cofactors]]:'''
  
 
* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
  
* '''Interactions:'''
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* '''[[SubtInteract|Interactions]]:'''
  
* '''Localization:'''
+
* '''[[Localization]]:'''
  
 
=== Database entries ===
 
=== Database entries ===
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yxeP_4056870_4058012_-1 sndB] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yxeP_4056870_4058012_-1 sndB] {{PubMed|22383849}}
  
* '''Sigma factor:''' [[SigA]] {{PubMed|16513748}}
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* '''[[Sigma factor]]:''' [[SigA]] {{PubMed|16513748}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 13:34, 5 January 2014

  • Description: sulphur compound N-deacetylase, the yxeK-snaB-yxeM-yxeN-yxeO-sndB-yxeQ operon may be implicated in the utilization of a modified cysteine variant

Gene name sndB
Synonyms yxeP
Essential no
Product sulphur compound N-deacetylase
Function unknown
Gene expression levels in SubtiExpress: yxeP
MW, pI 41 kDa, 5.322
Gene length, protein length 1140 bp, 380 aa
Immediate neighbours yxeQ, yxeO
Sequences Protein DNA DNA_with_flanks
Genetic context
YxeP context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YxeP expression.png















Categories containing this gene/protein

poorly characterized/ putative enzymes

This gene is a member of the following regulons

CymR regulon

The gene

Basic information

  • Locus tag: BSU39470

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: peptidase M20 family (according to Swiss-Prot)

Extended information on the protein

  • Kinetic information:
  • Modification:
  • Effectors of protein activity:

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • repressed in the presence of cysteine (CymR) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References