Difference between revisions of "SspB"
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* '''Kinetic information:''' | * '''Kinetic information:''' | ||
| − | * '''Domains:''' | + | * '''[[Domains]]:''' |
* '''Modification:''' | * '''Modification:''' | ||
| − | * ''' | + | * '''[[Cofactors]]:''' |
* '''Effectors of protein activity:''' | * '''Effectors of protein activity:''' | ||
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* '''Regulation:''' | * '''Regulation:''' | ||
** expressed during sporulation in the forespore ([[SigG]], [[SpoVT]]) {{PubMed|15699190,8755877}} | ** expressed during sporulation in the forespore ([[SigG]], [[SpoVT]]) {{PubMed|15699190,8755877}} | ||
| + | ** the mRNA accumulates in a ''[[ymdB]]'' mutant {{PubMed|24163345}} | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
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* '''Additional information:''' | * '''Additional information:''' | ||
| + | ** the mRNA half-life is about 13 min {{PubMed|24163345}} | ||
=Biological materials = | =Biological materials = | ||
| Line 137: | Line 139: | ||
=References= | =References= | ||
| − | + | <pubmed>16707666,1900507,2456528,3009398,11092849,7608092,15458366, 19542328 8755877 23064347 3087950 3125155 24163345</pubmed> | |
| − | <pubmed>16707666,1900507,2456528,3009398,11092849,7608092,15458366, 19542328 8755877 23064347 3087950 3125155</pubmed> | ||
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 17:45, 14 December 2013
- Description: small acid-soluble spore protein (major beta-type SASP)
| Gene name | sspB |
| Synonyms | |
| Essential | no |
| Product | small acid-soluble spore protein (major beta-type SASP) |
| Function | protection of spore DNA |
| Gene expression levels in SubtiExpress: sspB | |
| MW, pI | 6 kDa, 4.791 |
| Gene length, protein length | 201 bp, 67 aa |
| Immediate neighbours | yheF, yheE |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU09750
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: alpha/beta-type SASP family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Modification:
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P04832
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: sspB PubMed
- Regulation:
- Additional information:
- the mRNA half-life is about 13 min PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion: GP996 (cat, based on pSG1151), available in the Stülke lab
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
