Difference between revisions of "GerBB"
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* '''Catalyzed reaction/ biological activity:''' | * '''Catalyzed reaction/ biological activity:''' | ||
− | * | + | ** amino acid, polyamine, organocation (APC) family of transporters, [http://www.tcdb.org/search/result.php?tc=2.A.3 TC 2.A.3] |
− | * '''Paralogous protein(s):''' | + | * '''Paralogous protein(s):''' [[GerAB]], [[GerKB]], [[YndE]] |
=== Extended information on the protein === | === Extended information on the protein === | ||
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* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU35810] | * '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU35810] | ||
− | * ''' | + | * '''[http://www.tcdb.org/ T.C.] number:''' [http://www.tcdb.org/search/result.php?tc=2.A.3.9.2 2.A.3.9.2] |
=== Additional information=== | === Additional information=== |
Revision as of 13:21, 28 November 2013
- Description: nutrient receptor, germination response to the combination of glucose, fructose, and KCl
Gene name | gerBB |
Synonyms | |
Essential | no |
Product | nutrient receptor |
Function | germination |
Gene expression levels in SubtiExpress: gerBB | |
Interactions involving this protein in SubtInteract: GerBB | |
MW, pI | 41 kDa, 9.889 |
Gene length, protein length | 1104 bp, 368 aa |
Immediate neighbours | gerBA, gerBC |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
germination, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU35810
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- amino acid, polyamine, organocation (APC) family of transporters, TC 2.A.3
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- spore inner membrane PubMed
Database entries
- Structure:
- UniProt: P39570
- KEGG entry: [3]
Additional information
Expression and regulation
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed
Jing-qiao Zhang, Keren K Griffiths, Ann Cowan, Peter Setlow, Ji Yu
Expression level of Bacillus subtilis germinant receptors determines the average rate but not the heterogeneity of spore germination.
J Bacteriol: 2013, 195(8);1735-40
[PubMed:23396907]
[WorldCat.org]
[DOI]
(I p)
Keren K Griffiths, Jingqiao Zhang, Ann E Cowan, Ji Yu, Peter Setlow
Germination proteins in the inner membrane of dormant Bacillus subtilis spores colocalize in a discrete cluster.
Mol Microbiol: 2011, 81(4);1061-77
[PubMed:21696470]
[WorldCat.org]
[DOI]
(I p)
Swaroopa Atluri, Katerina Ragkousi, Donna E Cortezzo, Peter Setlow
Cooperativity between different nutrient receptors in germination of spores of Bacillus subtilis and reduction of this cooperativity by alterations in the GerB receptor.
J Bacteriol: 2006, 188(1);28-36
[PubMed:16352818]
[WorldCat.org]
[DOI]
(P p)
Takao Igarashi, Peter Setlow
Interaction between individual protein components of the GerA and GerB nutrient receptors that trigger germination of Bacillus subtilis spores.
J Bacteriol: 2005, 187(7);2513-8
[PubMed:15774895]
[WorldCat.org]
[DOI]
(P p)
Rosa-Martha Cabrera-Martinez, Federico Tovar-Rojo, Venkata Ramana Vepachedu, Peter Setlow
Effects of overexpression of nutrient receptors on germination of spores of Bacillus subtilis.
J Bacteriol: 2003, 185(8);2457-64
[PubMed:12670969]
[WorldCat.org]
[DOI]
(P p)
M Paidhungat, P Setlow
Isolation and characterization of mutations in Bacillus subtilis that allow spore germination in the novel germinant D-alanine.
J Bacteriol: 1999, 181(11);3341-50
[PubMed:10348844]
[WorldCat.org]
[DOI]
(P p)
B M Corfe, A Moir, D Popham, P Setlow
Analysis of the expression and regulation of the gerB spore germination operon of Bacillus subtilis 168.
Microbiology (Reading): 1994, 140 ( Pt 11);3079-83
[PubMed:7812448]
[WorldCat.org]
[DOI]
(P p)
B M Corfe, R L Sammons, D A Smith, C Mauël
The gerB region of the Bacillus subtilis 168 chromosome encodes a homologue of the gerA spore germination operon.
Microbiology (Reading): 1994, 140 ( Pt 3);471-8
[PubMed:8012571]
[WorldCat.org]
[DOI]
(P p)