Difference between revisions of "YcxD"
(→References) |
|||
| Line 1: | Line 1: | ||
| − | * '''Description:''' similar to transcriptional regulator (MocR/ GabR family) <br/><br/> | + | * '''Description:''' similar to transcriptional regulator ([[MocR/ GabR family]]) <br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
| Line 35: | Line 35: | ||
<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
| − | |||
| − | |||
| − | |||
| − | |||
<br/><br/> | <br/><br/> | ||
| Line 72: | Line 68: | ||
* '''Catalyzed reaction/ biological activity:''' | * '''Catalyzed reaction/ biological activity:''' | ||
| − | * '''Protein family:''' MocR/ GabR family [http://www.ncbi.nlm.nih.gov/sites/entrez/22020104 PubMed] | + | * '''Protein family:''' [[MocR/ GabR family]] [http://www.ncbi.nlm.nih.gov/sites/entrez/22020104 PubMed] |
| − | * '''Paralogous protein(s):''' none, but there are 7 members of the MocR/ GabR family in ''B. subtilis'' | + | * '''Paralogous protein(s):''' none, but there are 7 members of the [[MocR/ GabR family]] in ''B. subtilis'' |
=== Extended information on the protein === | === Extended information on the protein === | ||
Revision as of 16:31, 21 November 2013
- Description: similar to transcriptional regulator (MocR/ GabR family)
| Gene name | ycxD |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | unknown |
| Gene expression levels in SubtiExpress: ycxD | |
| MW, pI | 50 kDa, 8.567 |
| Gene length, protein length | 1332 bp, 444 aa |
| Immediate neighbours | ycxC, sfp/1 |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
transcription factors and their control
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU03560
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: MocR/ GabR family PubMed
- Paralogous protein(s): none, but there are 7 members of the MocR/ GabR family in B. subtilis
Extended information on the protein
- Kinetic information:
- Domains: N-terminal DNA-binding helix-turn-helix motif; C-terminal domain is homologous to PLP-binding large domain of aminotransferases.
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: Q08792
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
