YdeF

• Description: similar to transcriptional regulator (MocR/GabR family)
  
  

Gene name	ydeF
Synonyms
Essential	no
Product	unknown
Function	unknown
Gene expression levels in SubtiExpress: ydeF
MW, pI	51 kDa, 6.093
Gene length, protein length	1395 bp, 465 aa
Immediate neighbours	ydeE, ydeG
Sequences	Protein DNA DNA_with_flanks
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed

Categories containing this gene/protein

transcription factors and their control

The gene

Basic information

• Locus tag: BSU05180

Database entries

• DBTBS entry: no entry

• SubtiList entry: [1]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family: MocR/GabR family PubMed

• Paralogous protein(s): none, but there are 7 members of the MocR/GabR family in B. subtilis

Extended information on the protein

• Kinetic information:

• Domains: N-terminal DNA-binding helix-turn-helix motif; C-terminal domain is homologous to PLP-binding large domain of aminotransferases.

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:

Database entries

• Structure:

• UniProt: P96663

• KEGG entry: [2]

• E.C. number:

Expression and regulation

• Operon:

• Expression browser: ydeF PubMed

• Sigma factor:

• Regulation:

• Regulatory mechanism:

• Additional information:

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody: