Difference between revisions of "YdiO"
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= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
{{SubtiWiki category|[[DNA restriction/ modification]]}}, | {{SubtiWiki category|[[DNA restriction/ modification]]}}, | ||
| − | {{SubtiWiki category|[[essential genes]]}} | + | {{SubtiWiki category|[[essential genes]]}}, |
| + | {{SubtiWiki category|[[prophage 3]]}} | ||
= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ydiO_655223_656506_1 ydiO] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ydiO_655223_656506_1 ydiO] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' | + | * '''[[Sigma factor]]:''' |
* '''Regulation:''' | * '''Regulation:''' | ||
Revision as of 11:36, 11 September 2013
- Description: similar to DNA-3-methyladenine glycosidase II
| Gene name | ydiO |
| Synonyms | |
| Essential | yes PubMed |
| Product | unknown |
| Function | BsuM DNA modification |
| Gene expression levels in SubtiExpress: ydiO | |
| MW, pI | 48 kDa, 7.659 |
| Gene length, protein length | 1281 bp, 427 aa |
| Immediate neighbours | ydzV, ydiP |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
DNA restriction/ modification, essential genes, prophage 3
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU06060
Phenotypes of a mutant
essential PubMed, mutation is only possible in a ydiR, ydiS, or ydjA background (i. e., in the absence of the BsuM DNA restriction system) PubMed
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: O34939
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
