Difference between revisions of "YrpC"
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=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' | + | * '''Operon:''' ''yrpC'' {{PubMed|22383849}} |
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yrpC_2738308_2739105_1 yrpC] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yrpC_2738308_2739105_1 yrpC] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' | + | * '''[[Sigma factor]]:''' |
* '''Regulation:''' expressed only in minimal medium, not in complex medium {{PubMed|15347750}} | * '''Regulation:''' expressed only in minimal medium, not in complex medium {{PubMed|15347750}} | ||
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=References= | =References= | ||
| − | <pubmed>15347750,, </pubmed> | + | <pubmed>15347750,22383849, </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 13:13, 10 August 2013
- Description: glutamate racemase
| Gene name | yrpC |
| Synonyms | |
| Essential | no |
| Product | glutamate racemase |
| Function | peptidoglycan precursor biosynthesis |
| Gene expression levels in SubtiExpress: yrpC | |
| Metabolic function and regulation of this protein in SubtiPathways: Cell wall | |
| MW, pI | 29 kDa, 6.74 |
| Gene length, protein length | 795 bp, 265 aa |
| Immediate neighbours | yrpB, yrpD |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
cell wall synthesis, biosynthesis of cell wall components
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU26810
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: L-glutamate = D-glutamate (according to Swiss-Prot)
- Protein family: aspartate/glutamate racemases family (according to Swiss-Prot)
- Paralogous protein(s): RacE
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- UniProt: O05412
- KEGG entry: [2]
- E.C. number: 5.1.1.3
Additional information
Expression and regulation
- Operon: yrpC PubMed
- Regulation: expressed only in minimal medium, not in complex medium PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
