Difference between revisions of "SpoIIM"
Line 37: | Line 37: | ||
<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
− | |||
− | |||
− | |||
− | |||
<br/><br/> | <br/><br/> | ||
Line 114: | Line 110: | ||
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=spoIIM_2450403_2451047_-1 spoIIM] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=spoIIM_2450403_2451047_-1 spoIIM] {{PubMed|22383849}} | ||
− | * '''Sigma factor:''' [[SigE]] {{PubMed|8501065}} | + | * '''[[Sigma factor]]:''' [[SigE]] {{PubMed|8501065}} |
* '''Regulation:''' | * '''Regulation:''' | ||
Line 144: | Line 140: | ||
=References= | =References= | ||
− | <pubmed>17376078,11886548,15752199 ,8501065 15383836 </pubmed> | + | <pubmed>17376078,11886548,15752199 ,8501065 15383836 23859254 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] |
Revision as of 07:33, 26 July 2013
- Description: required for dissolution of the septal cell wall
Gene name | spoIIM |
Synonyms | |
Essential | no |
Product | sporulation protein |
Function | dissolution of the septal cell wall |
Gene expression levels in SubtiExpress: spoIIM | |
Interactions involving this protein in SubtInteract: SpoIIM | |
MW, pI | 24 kDa, 9.84 |
Gene length, protein length | 642 bp, 214 aa |
Immediate neighbours | fur, yqkK |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
cell wall/ other, sporulation proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU23530
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: P37873
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: spoIIM PubMed
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Jennifer Fredlund, Dan Broder, Tinya Fleming, Clémence Claussin, Kit Pogliano
The SpoIIQ landmark protein has different requirements for septal localization and immobilization.
Mol Microbiol: 2013, 89(6);1053-68
[PubMed:23859254]
[WorldCat.org]
[DOI]
(I p)
Arnaud Chastanet, Richard Losick
Engulfment during sporulation in Bacillus subtilis is governed by a multi-protein complex containing tandemly acting autolysins.
Mol Microbiol: 2007, 64(1);139-52
[PubMed:17376078]
[WorldCat.org]
[DOI]
(P p)
Thierry Doan, Kathleen A Marquis, David Z Rudner
Subcellular localization of a sporulation membrane protein is achieved through a network of interactions along and across the septum.
Mol Microbiol: 2005, 55(6);1767-81
[PubMed:15752199]
[WorldCat.org]
[DOI]
(P p)
Patrick Eichenberger, Masaya Fujita, Shane T Jensen, Erin M Conlon, David Z Rudner, Stephanie T Wang, Caitlin Ferguson, Koki Haga, Tsutomu Sato, Jun S Liu, Richard Losick
The program of gene transcription for a single differentiating cell type during sporulation in Bacillus subtilis.
PLoS Biol: 2004, 2(10);e328
[PubMed:15383836]
[WorldCat.org]
[DOI]
(I p)
P Eichenberger, P Fawcett, R Losick
A three-protein inhibitor of polar septation during sporulation in Bacillus subtilis.
Mol Microbiol: 2001, 42(5);1147-62
[PubMed:11886548]
[WorldCat.org]
[DOI]
(P p)
K Smith, P Youngman
Evidence that the spoIIM gene of Bacillus subtilis is transcribed by RNA polymerase associated with sigma E.
J Bacteriol: 1993, 175(11);3618-27
[PubMed:8501065]
[WorldCat.org]
[DOI]
(P p)