Difference between revisions of "YbxA"

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|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || ECF [[transporter|transporters]] (ATP-binding protein)
+
|style="background:#ABCDEF;" align="center"| '''Product''' || ECF [[transporters|transporter]] (ATP-binding protein)
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Function''' || uptake of micronutrients
 
|style="background:#ABCDEF;" align="center"|'''Function''' || uptake of micronutrients
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= [[Categories]] containing this gene/protein =
 
= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[ABC transporters]]}},
+
{{SubtiWiki category|[[transporters/ other]]}},
 
{{SubtiWiki category|[[membrane proteins]]}}
 
{{SubtiWiki category|[[membrane proteins]]}}
  
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* '''Catalyzed reaction/ biological activity:'''  
 
* '''Catalyzed reaction/ biological activity:'''  
  
* '''Protein family:''' [[ABC transporter]] domain (according to Swiss-Prot)
+
* '''Protein family:''' EcfA transporter
  
 
* '''Paralogous protein(s):'''
 
* '''Paralogous protein(s):'''
Line 95: Line 95:
  
 
* '''Structure:'''
 
* '''Structure:'''
 +
** [http://www.rcsb.org/pdb/explore/explore.do?structureId=4huq 4HUQ] (EcfA1-EcfA2-EcfT-FolT complex of ''Lactobacillus brevis''), {{PubMed|23584589}}
  
 
* '''UniProt:''' [http://www.uniprot.org/uniprot/P40735 P40735]
 
* '''UniProt:''' [http://www.uniprot.org/uniprot/P40735 P40735]

Revision as of 19:04, 12 July 2013

Gene name ybxA
Synonyms ybaD, ecfA1
Essential no
Product ECF transporter (ATP-binding protein)
Function uptake of micronutrients
Gene expression levels in SubtiExpress: ybxA
Interactions involving this protein in SubtInteract: YbxA
MW, pI 31 kDa, 4.766
Gene length, protein length 843 bp, 281 aa
Immediate neighbours rplQ, ybaE
Sequences Protein DNA DNA_with_flanks
Genetic context
YbxA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YbxA expression.png















Categories containing this gene/protein

transporters/ other, membrane proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU01450

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: EcfA transporter
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
    • 4HUQ (EcfA1-EcfA2-EcfT-FolT complex of Lactobacillus brevis), PubMed
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Reviews

Original publications