Difference between revisions of "YpsC"
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** YpsC interacts with the [[RNA polymerase]] {{PubMed|21710567}} | ** YpsC interacts with the [[RNA polymerase]] {{PubMed|21710567}} | ||
| − | * '''Localization:''' | + | * '''[[Localization]]:''' |
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ypsC_2330075_2331232_-1 ypsC] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ypsC_2330075_2331232_-1 ypsC] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' | + | * '''[[Sigma factor]]:''' |
* '''Regulation:''' | * '''Regulation:''' | ||
Revision as of 19:52, 7 July 2013
- Description: similar to SAM-dependent 23S rRNA methyltransferase
| Gene name | ypsC |
| Synonyms | |
| Essential | no |
| Product | 23S rRNA methyltransferase |
| Function | rRNA modification |
| Gene expression levels in SubtiExpress: ypsC | |
| MW, pI | 43 kDa, 8.011 |
| Gene length, protein length | 1155 bp, 385 aa |
| Immediate neighbours | ypzG, rnpB |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU22170
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- YpsC interacts with the RNA polymerase PubMed
Database entries
- Structure:
- UniProt: P50840
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
