Difference between revisions of "YwbO"

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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 600 bp, 200 aa  
 
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 600 bp, 200 aa  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ywcA]]'', ''[[ywbN]]''
+
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ywcA]]'', ''[[efeB]]''
 
|-
 
|-
 
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU38250 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU38250 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU38250 DNA_with_flanks]
 
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU38250 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU38250 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU38250 DNA_with_flanks]
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* '''Operon:'''
 
* '''Operon:'''
 
** ''ywbO'' {{PubMed|9353933}}
 
** ''ywbO'' {{PubMed|9353933}}
** ''[[ywbN]]-[[ywbO]]'' {{PubMed|18179421}}
+
** ''[[efeB]]-[[ywbO]]'' {{PubMed|18179421}}
  
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ywbO_3925797_3926399_-1 ywbO] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ywbO_3925797_3926399_-1 ywbO] {{PubMed|22383849}}
  
* '''Sigma factor:'''
+
* '''[[Sigma factor]]:'''
** ''[[ywbN]]'': [[SigM]] {{PubMed|18179421}}, [[SigX]], [[SigW]] {{PubMed|9683469}}
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** ''[[efeB]]'': [[SigM]] {{PubMed|18179421}}, [[SigX]], [[SigW]] {{PubMed|9683469}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 16:14, 21 June 2013

  • Description: unknown

Gene name ywbO
Synonyms ipa-30d
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ywbO
MW, pI 22 kDa, 4.641
Gene length, protein length 600 bp, 200 aa
Immediate neighbours ywcA, efeB
Sequences Protein DNA DNA_with_flanks
Genetic context
YwbO context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YwbO expression.png















Categories containing this gene/protein

cell envelope stress proteins (controlled by SigM, V, W, X, Y)

This gene is a member of the following regulons

SigM regulon, SigW regulon, SigX regulon

The gene

Basic information

  • Locus tag: BSU38250

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References