Difference between revisions of "YpsC"

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(References)
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=References=
 
=References=
'''Additional publications:''' {{PubMed|21710567}}
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<pubmed> 17010378 21710567</pubmed>
<pubmed> 17010378 </pubmed>
 
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 17:13, 6 June 2013

  • Description: similar to SAM-dependent 23S rRNA methyltransferase

Gene name ypsC
Synonyms
Essential no
Product 23S rRNA methyltransferase
Function rRNA modification
Gene expression levels in SubtiExpress: ypsC
MW, pI 43 kDa, 8.011
Gene length, protein length 1155 bp, 385 aa
Immediate neighbours ypzG, rnpB
Sequences Protein DNA DNA_with_flanks
Genetic context
YpsC context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YpsC expression.png
























Categories containing this gene/protein

translation

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU22170

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Olivier Delumeau, François Lecointe, Jan Muntel, Alain Guillot, Eric Guédon, Véronique Monnet, Michael Hecker, Dörte Becher, Patrice Polard, Philippe Noirot
The dynamic protein partnership of RNA polymerase in Bacillus subtilis.
Proteomics: 2011, 11(15);2992-3001
[PubMed:21710567] [WorldCat.org] [DOI] (I p)

Dmitry V Lesnyak, Petr V Sergiev, Alexey A Bogdanov, Olga A Dontsova
Identification of Escherichia coli m2G methyltransferases: I. the ycbY gene encodes a methyltransferase specific for G2445 of the 23 S rRNA.
J Mol Biol: 2006, 364(1);20-5
[PubMed:17010378] [WorldCat.org] [DOI] (P p)