Difference between revisions of "SigZ"

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Revision as of 14:02, 16 May 2013

Gene name sigZ
Synonyms
Essential no
Product RNA polymerase ECF-type sigma factor SigZ
Function transcription
Gene expression levels in SubtiExpress: sigZ
Interactions involving this protein in SubtInteract: SigZ
MW, pI 20 kDa, 6.237
Gene length, protein length 528 bp, 176 aa
Immediate neighbours zinT, yrpG
Sequences Protein DNA DNA_with_flanks
Genetic context
SigZ context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
SigZ expression.png


























Categories containing this gene/protein

transcription, sigma factors and their control

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU26840

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: ECF subfamily (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Yun Luo, Kei Asai, Yoshito Sadaie, John D Helmann
Transcriptomic and phenotypic characterization of a Bacillus subtilis strain without extracytoplasmic function σ factors.
J Bacteriol: 2010, 192(21);5736-45
[PubMed:20817771] [WorldCat.org] [DOI] (I p)

Thorsten Mascher, Anna-Barbara Hachmann, John D Helmann
Regulatory overlap and functional redundancy among Bacillus subtilis extracytoplasmic function sigma factors.
J Bacteriol: 2007, 189(19);6919-27
[PubMed:17675383] [WorldCat.org] [DOI] (P p)