Difference between revisions of "Xpf"
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| − | |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=xpf_1324471_1324980_1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:xpf_expression.png|500px]] | + | |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=xpf_1324471_1324980_1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:xpf_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU12560]] |
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Revision as of 13:02, 16 May 2013
- Description: PBSX phage RNA polymerase sigma factor
| Gene name | xpf |
| Synonyms | pcf, ykxE |
| Essential | no |
| Product | PBSX prophage RNA polymerase sigma factor |
| Function | transcription of PBSX prophage genes |
| Gene expression levels in SubtiExpress: xpf | |
| Interactions involving this protein in SubtInteract: Xpf | |
| MW, pI | 19 kDa, 8.084 |
| Gene length, protein length | 507 bp, 169 aa |
| Immediate neighbours | xtrA, xtmA |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
transcription, sigma factors and their control, PBSX prophage
This gene is a member of the following regulons
The Xpf regulon:
The gene
Basic information
- Locus tag: BSU12560
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P39784
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
