Difference between revisions of "SndB"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yxeQ]]'', ''[[yxeO]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yxeQ]]'', ''[[yxeO]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU39470 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU39470 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU39470 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU39470 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU39470 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU39470 DNA_with_flanks]
 
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Revision as of 11:40, 14 May 2013

  • Description: similar to aminoacylase

Gene name yxeP
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yxeP
MW, pI 41 kDa, 5.322
Gene length, protein length 1140 bp, 380 aa
Immediate neighbours yxeQ, yxeO
Sequences Protein DNA DNA_with_flanks
Genetic context
YxeP context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YxeP expression.png


























Categories containing this gene/protein

poorly characterized/ putative enzymes

This gene is a member of the following regulons

CymR regulon

The gene

Basic information

  • Locus tag: BSU39470

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: peptidase M20 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • repressed in the presence of cysteine (CymR) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Sergine Even, Pierre Burguière, Sandrine Auger, Olga Soutourina, Antoine Danchin, Isabelle Martin-Verstraete
Global control of cysteine metabolism by CymR in Bacillus subtilis.
J Bacteriol: 2006, 188(6);2184-97
[PubMed:16513748] [WorldCat.org] [DOI] (P p)

Ken-Ichi Yoshida, Izumi Ishio, Eishi Nagakawa, Yoshiyuki Yamamoto, Mami Yamamoto, Yasutaro Fujita
Systematic study of gene expression and transcription organization in the gntZ-ywaA region of the Bacillus subtilis genome.
Microbiology (Reading): 2000, 146 ( Pt 3);573-579
[PubMed:10746760] [WorldCat.org] [DOI] (P p)