Difference between revisions of "RsfA"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ywzC]]'', ''[[ywfM]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ywzC]]'', ''[[ywfM]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU37620 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU37620 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU37620 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU37620 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU37620 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU37620 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:rsfA_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:rsfA_context.gif]]

Revision as of 11:33, 14 May 2013

  • Description: probable regulator of transcription of SigF-dependent genes

Gene name rsfA
Synonyms ywfN, ipa-92r
Essential no
Product regulator of SigF activity
Function control of expression of SigF-dependent genes
Gene expression levels in SubtiExpress: rsfA
MW, pI 29 kDa, 5.13
Gene length, protein length 774 bp, 258 aa
Immediate neighbours ywzC, ywfM
Sequences Protein DNA DNA_with_flanks
Genetic context
RsfA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
RsfA expression.png
























Categories containing this gene/protein

sigma factors and their control, sporulation proteins

This gene is a member of the following regulons

RsfA regulon, SigF regulon, SigG regulon

The RsfA regulon:

The gene

Basic information

  • Locus tag: BSU37620

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed during sporulation in the forespore (SigF) PubMed
    • repressed by casamino acids PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References