Difference between revisions of "OpuBD"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yvaQ]]'', ''[[opuBC]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yvaQ]]'', ''[[opuBC]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU33700 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU33700 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU33700 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU33700 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU33700 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU33700 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:opuBD_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:opuBD_context.gif]]

Revision as of 11:16, 14 May 2013

Gene name opuBD
Synonyms proZ
Essential no
Product choline ABC transporter (membane protein)
Function compatible solute transport
Gene expression levels in SubtiExpress: opuBD
Interactions involving this protein in SubtInteract: OpuBD
Metabolic function and regulation of this protein in SubtiPathways:
Stress
MW, pI 23 kDa, 10.06
Gene length, protein length 678 bp, 226 aa
Immediate neighbours yvaQ, opuBC
Sequences Protein DNA DNA_with_flanks
Genetic context
OpuBD context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
OpuBD expression.png




























Categories containing this gene/protein

ABC transporters, coping with hyper-osmotic stress, membrane proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU33700

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: CysTW subfamily (according to Swiss-Prot)
  • Paralogous protein(s): OpuCD

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed