Difference between revisions of "LuxS"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ytkA]]'', ''[[ytjA]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ytkA]]'', ''[[ytjA]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU30670 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU30670 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU30670 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU30670 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU30670 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU30670 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:luxS_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:luxS_context.gif]]

Revision as of 11:05, 14 May 2013

  • Description: S-ribosylhomocysteine lyase, autoinducer-2 production protein, required for swarming motility and biofilm formation

Gene name luxS
Synonyms ytjB
Essential no
Product S-ribosylhomocysteine lyase
Function methionine salvage
Gene expression levels in SubtiExpress: luxS
Metabolic function and regulation of this protein in SubtiPathways:
Cys, Met & Sulfate assimilation
MW, pI 17 kDa, 5.168
Gene length, protein length 471 bp, 157 aa
Immediate neighbours ytkA, ytjA
Sequences Protein DNA DNA_with_flanks
Genetic context
LuxS context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
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Categories containing this gene/protein

biosynthesis/ acquisition of amino acids, motility and chemotaxis, quorum sensing, biofilm formation

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU30670

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: S-(5-deoxy-D-ribos-5-yl)-L-homocysteine = L-homocysteine + (4S)-4,5-dihydroxypentan-2,3-dione (according to Swiss-Prot)
  • Protein family: luxS family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity: subject to feedback inhibition PubMed

Database entries

  • Structure: 1JQW (complex with homocysteine), 1J98
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information: subject to feedback inhibition PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References