Difference between revisions of "LuxS"
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ytkA]]'', ''[[ytjA]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ytkA]]'', ''[[ytjA]]'' | ||
|- | |- | ||
− | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU30670 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU30670 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU30670 | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU30670 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU30670 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU30670 DNA_with_flanks] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:luxS_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:luxS_context.gif]] |
Revision as of 11:05, 14 May 2013
- Description: S-ribosylhomocysteine lyase, autoinducer-2 production protein, required for swarming motility and biofilm formation
Gene name | luxS |
Synonyms | ytjB |
Essential | no |
Product | S-ribosylhomocysteine lyase |
Function | methionine salvage |
Gene expression levels in SubtiExpress: luxS | |
Metabolic function and regulation of this protein in SubtiPathways: Cys, Met & Sulfate assimilation | |
MW, pI | 17 kDa, 5.168 |
Gene length, protein length | 471 bp, 157 aa |
Immediate neighbours | ytkA, ytjA |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed 500px |
Contents
Categories containing this gene/protein
biosynthesis/ acquisition of amino acids, motility and chemotaxis, quorum sensing, biofilm formation
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU30670
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: S-(5-deoxy-D-ribos-5-yl)-L-homocysteine = L-homocysteine + (4S)-4,5-dihydroxypentan-2,3-dione (according to Swiss-Prot)
- Protein family: luxS family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity: subject to feedback inhibition PubMed
Database entries
- UniProt: O34667
- KEGG entry: [3]
- E.C. number: 4.4.1.21
Additional information
Expression and regulation
- Operon: luxS PubMed
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information: subject to feedback inhibition PubMed
Biological materials
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References