Difference between revisions of "YqiB"

From SubtiWiki
Jump to: navigation, search
Line 24: Line 24:
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yqiC]]'', ''[[folD]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yqiC]]'', ''[[folD]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU24300 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU24300 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU24300 Advanced_DNA]
+
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU24300 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU24300 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU24300 DNA_with_flanks]
 
|-
 
|-
 
|-
 
|-

Revision as of 10:41, 14 May 2013

  • Description: similar to exodeoxyribonuclease VII (large subunit)

Gene name yqiB
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yqiB
Interactions involving this protein in SubtInteract: YqiB
MW, pI 50 kDa, 9.546
Gene length, protein length 1344 bp, 448 aa
Immediate neighbours yqiC, folD
Sequences Protein DNA DNA_with_flanks
Genetic context
YqiB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YqiB expression.png
























Categories containing this gene/protein

genetics/ other

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU24300

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield nucleoside 5'-phosphates (according to Swiss-Prot)
  • Protein family: xseA family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed