Difference between revisions of "SpoVAC"
| Line 24: | Line 24: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[spoVAD]]'', ''[[spoVAB]]''  | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[spoVAD]]'', ''[[spoVAB]]''  | ||
|-  | |-  | ||
| − | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU23420 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU23420 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU23420   | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU23420 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU23420 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU23420 DNA_with_flanks]  | 
|-  | |-  | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:spoVAC_context.gif]]  | |colspan="2" | '''Genetic context''' <br/> [[Image:spoVAC_context.gif]]  | ||
Revision as of 10:37, 14 May 2013
-  Description: essential for the uptake of the 1:1 chelate of pyridine-2,6-dicarboxylic acid (DPA(2,6)) and Ca(2+) into developing spores, required for spore maturation 
 
| Gene name | spoVAC | 
| Synonyms | |
| Essential | no | 
| Product | unknown | 
| Function | spore maturation | 
| Gene expression levels in SubtiExpress: spoVAC | |
|  Metabolic function and regulation of this protein in SubtiPathways:  Lys, Thr  | |
| MW, pI | 15 kDa, 9.461 | 
| Gene length, protein length | 450 bp, 150 aa | 
| Immediate neighbours | spoVAD, spoVAB | 
| Sequences | Protein DNA DNA_with_flanks | 
 Genetic context  
  This image was kindly provided by SubtiList 
 | |
Expression at a glance   PubMed 
 | |
Contents
Categories containing this gene/protein
sporulation proteins, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU23420
 
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
 
- SubtiList entry: [2]
 
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
 
- Protein family:
 
- Paralogous protein(s):
 
Extended information on the protein
- Kinetic information:
 
- Domains:
 
- Modification:
 
- Cofactor(s):
 
- Effectors of protein activity:
 
Database entries
- Structure:
 
- UniProt: P40868
 
- KEGG entry: [3]
 
- E.C. number:
 
Additional information
Expression and regulation
- Additional information:
 
Biological materials
- Mutant:
 
- Expression vector:
 
- lacZ fusion:
 
- GFP fusion:
 
- two-hybrid system:
 
- Antibody:
 
Labs working on this gene/protein
- Peter Setlow, University of Connecticut Health Center, USA
 
Your additional remarks
References
Yunfeng Li, Andrew Davis, George Korza, Pengfei Zhang, Yong-qing Li, Barbara Setlow, Peter Setlow, Bing Hao  
Role of a SpoVA protein in dipicolinic acid uptake into developing spores of Bacillus subtilis. 
J Bacteriol: 2012, 194(8);1875-84 
[PubMed:22328679]
  [WorldCat.org]
 [DOI]
 (I p)
Venkata Ramana Vepachedu, Peter Setlow  
Role of SpoVA proteins in release of dipicolinic acid during germination of Bacillus subtilis spores triggered by dodecylamine or lysozyme. 
J Bacteriol: 2007, 189(5);1565-72 
[PubMed:17158659]
  [WorldCat.org]
 [DOI]
 (P p)
Leif Steil, Mónica Serrano, Adriano O Henriques, Uwe Völker  
Genome-wide analysis of temporally regulated and compartment-specific gene expression in sporulating cells of Bacillus subtilis. 
Microbiology (Reading): 2005, 151(Pt 2);399-420 
[PubMed:15699190]
  [WorldCat.org]
 [DOI]
 (P p)
Venkata Ramana Vepachedu, Peter Setlow  
Analysis of the germination of spores of Bacillus subtilis with temperature sensitive spo mutations in the spoVA operon. 
FEMS Microbiol Lett: 2004, 239(1);71-7 
[PubMed:15451103]
  [WorldCat.org]
 [DOI]
 (P p)
Federico Tovar-Rojo, Monica Chander, Barbara Setlow, Peter Setlow  
The products of the spoVA operon are involved in dipicolinic acid uptake into developing spores of Bacillus subtilis. 
J Bacteriol: 2002, 184(2);584-7 
[PubMed:11751839]
  [WorldCat.org]
 [DOI]
 (P p)
I Bagyan, J Hobot, S Cutting  
A compartmentalized regulator of developmental gene expression in Bacillus subtilis. 
J Bacteriol: 1996, 178(15);4500-7 
[PubMed:8755877]
  [WorldCat.org]
 [DOI]
 (P p)
V Azevedo, A Sorokin, S D Ehrlich, P Serror  
The transcriptional organization of the Bacillus subtilis 168 chromosome region between the spoVAF and serA genetic loci. 
Mol Microbiol: 1993, 10(2);397-405 
[PubMed:7934830]
  [WorldCat.org]
 [DOI]
 (P p)
B Moldover, P J Piggot, M D Yudkin  
Identification of the promoter and the transcriptional start site of the spoVA operon of Bacillus subtilis and Bacillus licheniformis. 
J Gen Microbiol: 1991, 137(3);527-31 
[PubMed:1903432]
  [WorldCat.org]
 [DOI]
 (P p)
J Errington, J Mandelstam  
Use of a lacZ gene fusion to determine the dependence pattern and the spore compartment expression of sporulation operon spoVA in spo mutants of Bacillus subtilis. 
J Gen Microbiol: 1986, 132(11);2977-85 
[PubMed:3114420]
  [WorldCat.org]
 [DOI]
 (P p)
P Fort, J Errington  
Nucleotide sequence and complementation analysis of a polycistronic sporulation operon, spoVA, in Bacillus subtilis. 
J Gen Microbiol: 1985, 131(5);1091-105 
[PubMed:3926949]
  [WorldCat.org]
 [DOI]
 (P p)
J Errington, J Mandelstam  
Genetic and phenotypic characterization of a cluster of mutations in the spoVA locus of Bacillus subtilis. 
J Gen Microbiol: 1984, 130(8);2115-21 
[PubMed:6432957]
  [WorldCat.org]
 [DOI]
 (P p)

