Difference between revisions of "YobK"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yobJ]]'', ''[[yobL]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yobJ]]'', ''[[yobL]]''
 
|-
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU18990 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU18990 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU18990 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU18990 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU18990 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU18990 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:yobK_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yobK_context.gif]]

Revision as of 10:24, 14 May 2013

  • Description: antitoxin

Gene name yobK
Synonyms
Essential no
Product antitoxin
Function inhibition of the cytotoxic activity of YobL
Gene expression levels in SubtiExpress: yobK
Interactions involving this protein in SubtInteract: YobK
MW, pI 17 kDa, 3.97
Gene length, protein length 456 bp, 152 aa
Immediate neighbours yobJ, yobL
Sequences Protein DNA DNA_with_flanks
Genetic context
YobK context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YobK expression.png















Categories containing this gene/protein

toxins, antitoxins and immunity against toxins, membrane proteins,

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU18990

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Laura E Holberger, Fernando Garza-Sánchez, James Lamoureux, David A Low, Christopher S Hayes
A novel family of toxin/antitoxin proteins in Bacillus species.
FEBS Lett: 2012, 586(2);132-6
[PubMed:22200572] [WorldCat.org] [DOI] (I p)