Difference between revisions of "FliM"

From SubtiWiki
Jump to: navigation, search
Line 22: Line 22:
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[fliL]]'', ''[[fliY]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[fliL]]'', ''[[fliY]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU16310 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU16310 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU16310 Advanced_DNA]
+
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU16310 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU16310 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU16310 DNA_with_flanks]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:fliM_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:fliM_context.gif]]

Revision as of 10:14, 14 May 2013

  • Description: flagellar motor switch protein, part of the basal body C-ring

Gene name fliM
Synonyms
Essential no
Product flagellar motor switch protein
Function movement and chemotaxis
Gene expression levels in SubtiExpress: fliM
MW, pI 37 kDa, 4.691
Gene length, protein length 996 bp, 332 aa
Immediate neighbours fliL, fliY
Sequences Protein DNA DNA_with_flanks
Genetic context
FliM context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
FliM expression.png















Categories containing this gene/protein

motility and chemotaxis, membrane proteins

This gene is a member of the following regulons

CodY regulon, SigD regulon, Spo0A regulon

The gene

Basic information

  • Locus tag: BSU16310

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: fliM family (according to Swiss-Prot)
  • Paralogous protein(s): FliY

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization:
    • cell membrane (according to Swiss-Prot)
    • localizes as individual spots (puncta), this erquires FliF PubMed

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • repressed under conditions that trigger sporulation (Spo0A) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References