Difference between revisions of "XtmB"

From SubtiWiki
Jump to: navigation, search
Line 21: Line 21:
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[xtmA]]'', ''[[xkdE]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[xtmA]]'', ''[[xkdE]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU12580 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU12580 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU12580 Advanced_DNA]
+
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU12580 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU12580 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU12580 DNA_with_flanks]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:xtmB_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:xtmB_context.gif]]

Revision as of 09:59, 14 May 2013

  • Description: PBSX terminase (large subunit)

Gene name xtmB
Synonyms ykxG
Essential no
Product PBSX terminase (large subunit)
Function phage DNA replication
Gene expression levels in SubtiExpress: xtmB
MW, pI 50 kDa, 8.872
Gene length, protein length 1299 bp, 433 aa
Immediate neighbours xtmA, xkdE
Sequences Protein DNA DNA_with_flanks
Genetic context
XtmB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
XtmB expression.png
























Categories containing this gene/protein

DNA replication, PBSX prophage

This gene is a member of the following regulons

Xpf regulon

The gene

Basic information

  • Locus tag: BSU12580

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

G E McDonnell, H Wood, K M Devine, D J McConnell
Genetic control of bacterial suicide: regulation of the induction of PBSX in Bacillus subtilis.
J Bacteriol: 1994, 176(18);5820-30
[PubMed:8083174] [WorldCat.org] [DOI] (P p)

H E Wood, M T Dawson, K M Devine, D J McConnell
Characterization of PBSX, a defective prophage of Bacillus subtilis.
J Bacteriol: 1990, 172(5);2667-74
[PubMed:2110147] [WorldCat.org] [DOI] (P p)