Difference between revisions of "YclP"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yclO]]'', ''[[yclQ]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yclO]]'', ''[[yclQ]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU03820 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU03820 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU03820 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU03820 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU03820 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU03820 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:yclP_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yclP_context.gif]]

Revision as of 09:28, 14 May 2013

  • Description: petrobactin (3.4-catecholate siderophore) ABC transporter (ATP-binding protein)

Gene name yclP
Synonyms
Essential no
Product petrobactin ABC transporter (ATP-binding protein)
Function acquisition of iron
Gene expression levels in SubtiExpress: yclP
Interactions involving this protein in SubtInteract: YclP
MW, pI 28 kDa, 5.085
Gene length, protein length 756 bp, 252 aa
Immediate neighbours yclO, yclQ
Sequences Protein DNA DNA_with_flanks
Genetic context
YclP context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YclP expression.png
























Categories containing this gene/protein

ABC transporters, acquisition of iron, iron metabolism, membrane proteins

This gene is a member of the following regulons

Fur regulon

The gene

Basic information

  • Locus tag: BSU03820

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: uptake of the siderophore petrobactin PubMed
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
    • repressed unless the cells enter an iron starvation (Fur) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Anna M Zawadzka, Youngchang Kim, Natalia Maltseva, Rita Nichiporuk, Yao Fan, Andrzej Joachimiak, Kenneth N Raymond
Characterization of a Bacillus subtilis transporter for petrobactin, an anthrax stealth siderophore.
Proc Natl Acad Sci U S A: 2009, 106(51);21854-9
[PubMed:19955416] [WorldCat.org] [DOI] (I p)

Noel Baichoo, Tao Wang, Rick Ye, John D Helmann
Global analysis of the Bacillus subtilis Fur regulon and the iron starvation stimulon.
Mol Microbiol: 2002, 45(6);1613-29
[PubMed:12354229] [WorldCat.org] [DOI] (P p)

Y Quentin, G Fichant, F Denizot
Inventory, assembly and analysis of Bacillus subtilis ABC transport systems.
J Mol Biol: 1999, 287(3);467-84
[PubMed:10092453] [WorldCat.org] [DOI] (P p)