Difference between revisions of "CsfB"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[rrnA-5S]]'', ''[[xpaC]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[rrnA-5S]]'', ''[[xpaC]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU00240 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU00240 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU00240 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU00240 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU00240 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU00240 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:csfB_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:csfB_context.gif]]

Revision as of 09:07, 14 May 2013

  • Description: forespore-specific protein, inhibitor of SigG and of SigE

Gene name gin
Synonyms csfB, yaaM
Essential no
Product inhibitor of SigG and SigE
Function control of SigG and SigE activity
Gene expression levels in SubtiExpress: gin
Interactions involving this protein in SubtInteract: Gin
MW, pI 7 kDa, 7.671
Gene length, protein length 192 bp, 64 aa
Immediate neighbours rrnA-5S, xpaC
Sequences Protein DNA DNA_with_flanks
Genetic context
CsfB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
Gin expression.png
























Categories containing this gene/protein

sigma factors and their control, sporulation proteins

This gene is a member of the following regulons

SigF regulon

The gene

Basic information

  • Locus tag: BSU00240

Phenotypes of a mutant

premature activation of SigG PubMed

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: gin
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed