Difference between revisions of "Rho"
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|style="background:#ABCDEF;" align="center"|'''Function''' || transcriptional termination | |style="background:#ABCDEF;" align="center"|'''Function''' || transcriptional termination | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU37080 rho] |
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/Rho Rho] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/Rho Rho] | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[rpmE]]'', ''[[glpX]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[rpmE]]'', ''[[glpX]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU37080 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU37080 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU37080 Advanced_DNA] |
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Revision as of 14:05, 13 May 2013
- Description: transcriptional termination protein
| Gene name | rho |
| Synonyms | |
| Essential | no |
| Product | transcriptional termination protein |
| Function | transcriptional termination |
| Gene expression levels in SubtiExpress: rho | |
| Interactions involving this protein in SubtInteract: Rho | |
| MW, pI | 48 kDa, 6.865 |
| Gene length, protein length | 1281 bp, 427 aa |
| Immediate neighbours | rpmE, glpX |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU37080
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: rho family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- UniProt: Q03222
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Reviews
Marc Boudvillain, Nara Figueroa-Bossi, Lionello Bossi
Terminator still moving forward: expanding roles for Rho factor.
Curr Opin Microbiol: 2013, 16(2);118-24
[PubMed:23347833]
[WorldCat.org]
[DOI]
(I p)
M Sofia Ciampi
Rho-dependent terminators and transcription termination.
Microbiology (Reading): 2006, 152(Pt 9);2515-2528
[PubMed:16946247]
[WorldCat.org]
[DOI]
(P p)
John P Richardson
Loading Rho to terminate transcription.
Cell: 2003, 114(2);157-9
[PubMed:12887917]
[WorldCat.org]
[DOI]
(P p)
J P Richardson
Structural organization of transcription termination factor Rho.
J Biol Chem: 1996, 271(3);1251-4
[PubMed:8576105]
[WorldCat.org]
[DOI]
(P p)
Original publications
Additional publications: PubMed
