Difference between revisions of "CoxA"

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|style="background:#ABCDEF;" align="center"|'''Function''' || resistance of the spore  
 
|style="background:#ABCDEF;" align="center"|'''Function''' || resistance of the spore  
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU27830 coxA]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU27830 coxA]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 19 kDa, 9.224   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 19 kDa, 9.224   
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yrbC]]'', ''[[safA]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yrbC]]'', ''[[safA]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB14743&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU27830 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU27830 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU27830 Advanced_DNA]
 
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Revision as of 13:28, 13 May 2013

  • Description: spore cortex protein

Gene name coxA
Synonyms yrbB
Essential no
Product spore cortex protein
Function resistance of the spore
Gene expression levels in SubtiExpress: coxA
MW, pI 19 kDa, 9.224
Gene length, protein length 516 bp, 172 aa
Immediate neighbours yrbC, safA
Sequences Protein DNA Advanced_DNA
Genetic context
CoxA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
CoxA expression.png
























Categories containing this gene/protein

sporulation proteins

This gene is a member of the following regulons

SigE regulon

The gene

Basic information

  • Locus tag: BSU27830

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed early during sporulation in the mother cell (SigE) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

H Takamatsu, T Kodama, T Nakayama, K Watabe
Characterization of the yrbA gene of Bacillus subtilis, involved in resistance and germination of spores.
J Bacteriol: 1999, 181(16);4986-94
[PubMed:10438771] [WorldCat.org] [DOI] (P p)