Difference between revisions of "ComN"
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|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of competence and DNA uptake | |style="background:#ABCDEF;" align="center"|'''Function''' || regulation of competence and DNA uptake | ||
|- | |- | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU27660 comN] |
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/ComN ComN] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/ComN ComN] | ||
| Line 24: | Line 24: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[secDF]]'', ''[[spoVB]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[secDF]]'', ''[[spoVB]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU27660 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU27660 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU27660 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:yrzD_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yrzD_context.gif]] | ||
Revision as of 13:27, 13 May 2013
- Description: mediates post-transcriptional control of comE operon expression
| Gene name | comN |
| Synonyms | yrzD |
| Essential | no |
| Product | post-transcriptional regulator of comE expression |
| Function | regulation of competence and DNA uptake |
| Gene expression levels in SubtiExpress: comN | |
| Interactions involving this protein in SubtInteract: ComN | |
| MW, pI | 11 kDa, 4.622 |
| Gene length, protein length | 294 bp, 98 aa |
| Immediate neighbours | secDF, spoVB |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
genetic competence, membrane proteins
This gene is a member of the following regulons
The ComN regulon: comEA-comEB-comEC
The gene
Basic information
- Locus tag: BSU27660
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: O32049
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
