Difference between revisions of "TrmU"
| Line 14: | Line 14: | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || tRNA modification | |style="background:#ABCDEF;" align="center"|'''Function''' || tRNA modification | ||
|- | |- | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU27500 trmU] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 42 kDa, 4.729 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 42 kDa, 4.729 | ||
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yrrB]]'', ''[[yrvO]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yrrB]]'', ''[[yrvO]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU27500 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU27500 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU27500 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:trmU_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:trmU_context.gif]] | ||
Revision as of 13:27, 13 May 2013
- Description: tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase
| Gene name | trmU |
| Synonyms | yrrA |
| Essential | yes PubMed |
| Product | tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase |
| Function | tRNA modification |
| Gene expression levels in SubtiExpress: trmU | |
| MW, pI | 42 kDa, 4.729 |
| Gene length, protein length | 1122 bp, 374 aa |
| Immediate neighbours | yrrB, yrvO |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
translation, essential genes, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU27500
Phenotypes of a mutant
essential PubMed
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: mnmA/TRMU family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cell membrane (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: O35020
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
