Difference between revisions of "PbpI"
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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown | |style="background:#ABCDEF;" align="center"|'''Function''' || unknown | ||
|- | |- | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU27310 pbpI] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 65 kDa, 9.012 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 65 kDa, 9.012 | ||
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yrrS]]'', ''[[greA]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yrrS]]'', ''[[greA]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU27310 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU27310 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU27310 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:yrrR_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yrrR_context.gif]] | ||
Revision as of 13:26, 13 May 2013
- Description: sporulation-specific penicillin-binding protein 4b
| Gene name | pbpI |
| Synonyms | yrrR |
| Essential | no |
| Product | penicillin-binding protein 4b |
| Function | unknown |
| Gene expression levels in SubtiExpress: pbpI | |
| MW, pI | 65 kDa, 9.012 |
| Gene length, protein length | 1752 bp, 584 aa |
| Immediate neighbours | yrrS, greA |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
cell wall synthesis, sporulation proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU27310
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: transpeptidase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- may be part of the cell wall biosynthetic complex PubMed
Database entries
- Structure:
- UniProt: O32032
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Stephanie T Wang, Barbara Setlow, Erin M Conlon, Jessica L Lyon, Daisuke Imamura, Tsutomu Sato, Peter Setlow, Richard Losick, Patrick Eichenberger
The forespore line of gene expression in Bacillus subtilis.
J Mol Biol: 2006, 358(1);16-37
[PubMed:16497325]
[WorldCat.org]
[DOI]
(P p)
Dirk-Jan Scheffers
Dynamic localization of penicillin-binding proteins during spore development in Bacillus subtilis.
Microbiology (Reading): 2005, 151(Pt 3);999-1012
[PubMed:15758244]
[WorldCat.org]
[DOI]
(P p)
Leif Steil, Mónica Serrano, Adriano O Henriques, Uwe Völker
Genome-wide analysis of temporally regulated and compartment-specific gene expression in sporulating cells of Bacillus subtilis.
Microbiology (Reading): 2005, 151(Pt 2);399-420
[PubMed:15699190]
[WorldCat.org]
[DOI]
(P p)
Yuping Wei, Derrell C McPherson, David L Popham
A mother cell-specific class B penicillin-binding protein, PBP4b, in Bacillus subtilis.
J Bacteriol: 2004, 186(1);258-61
[PubMed:14679248]
[WorldCat.org]
[DOI]
(P p)
