Difference between revisions of "FolD"

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|style="background:#ABCDEF;" align="center"|'''Function''' || formylation of Met-tRNA(fMet)  
 
|style="background:#ABCDEF;" align="center"|'''Function''' || formylation of Met-tRNA(fMet)  
 
|-
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU24310 folD]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU24310 folD]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 30 kDa, 5.6   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 30 kDa, 5.6   
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yqiB]]'', ''[[nusB]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yqiB]]'', ''[[nusB]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB14362&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU24310 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU24310 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU24310 Advanced_DNA]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:folD_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:folD_context.gif]]

Revision as of 13:15, 13 May 2013

  • Description: methylenetetrahydrofolate dehydrogenase (NADP)

Gene name folD
Synonyms yqiA
Essential yes PubMed
Product methylenetetrahydrofolate dehydrogenase (NADP)
Function formylation of Met-tRNA(fMet)
Gene expression levels in SubtiExpress: folD
MW, pI 30 kDa, 5.6
Gene length, protein length 849 bp, 283 aa
Immediate neighbours yqiB, nusB
Sequences Protein DNA Advanced_DNA
Genetic context
FolD context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
FolD expression.png
























Categories containing this gene/protein

translation, essential genes

This gene is a member of the following regulons

PurR regulon

The gene

Basic information

  • Locus tag: BSU24310

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: 5,10-methylenetetrahydrofolate + NADP+ = 5,10-methenyltetrahydrofolate + NADPH (according to Swiss-Prot)
  • Protein family: tetrahydrofolate dehydrogenase/cyclohydrolase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
    • repressed in the presence of purine nucleotides (PurR) PubMed
  • Regulatory mechanism:
    • PurR: transcription repression (molecular inducer: PRPP) PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References