Difference between revisions of "CgeD"

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|style="background:#ABCDEF;" align="center"|'''Function''' || maturation of the outermost layer of the spore
 
|style="background:#ABCDEF;" align="center"|'''Function''' || maturation of the outermost layer of the spore
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU19760 cgeD]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU19760 cgeD]
 
|-
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 49 kDa, 7.193   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 49 kDa, 7.193   
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[cgeE]]'', ''[[cgeC]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[cgeE]]'', ''[[cgeC]]''
 
|-
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB13867&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU19760 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU19760 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU19760 Advanced_DNA]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:cgeD_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:cgeD_context.gif]]

Revision as of 13:02, 13 May 2013

  • Description: maturation of the outermost layer of the spore

Gene name cgeD
Synonyms cgeBB
Essential no
Product unknown
Function maturation of the outermost layer of the spore
Gene expression levels in SubtiExpress: cgeD
MW, pI 49 kDa, 7.193
Gene length, protein length 1278 bp, 426 aa
Immediate neighbours cgeE, cgeC
Sequences Protein DNA Advanced_DNA
Genetic context
CgeD context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
CgeD expression.png
























Categories containing this gene/protein

sporulation proteins

This gene is a member of the following regulons

GerE regulon, SigK regulon

The gene

Basic information

  • Locus tag: BSU19760

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed late during sporulation in the mother cell (SigK, GerE) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Leif Steil, Mónica Serrano, Adriano O Henriques, Uwe Völker
Genome-wide analysis of temporally regulated and compartment-specific gene expression in sporulating cells of Bacillus subtilis.
Microbiology (Reading): 2005, 151(Pt 2);399-420
[PubMed:15699190] [WorldCat.org] [DOI] (P p)

S Roels, R Losick
Adjacent and divergently oriented operons under the control of the sporulation regulatory protein GerE in Bacillus subtilis.
J Bacteriol: 1995, 177(21);6263-75
[PubMed:7592393] [WorldCat.org] [DOI] (P p)