Difference between revisions of "SpoVIF"
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|style="background:#ABCDEF;" align="center"|'''Function''' || required for spore coat assembly and resistance | |style="background:#ABCDEF;" align="center"|'''Function''' || required for spore coat assembly and resistance | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU11810 spoVIF] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 11 kDa, 10.201 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 11 kDa, 10.201 | ||
| Line 21: | Line 21: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yjcZ]]'', ''[[yjcD]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yjcZ]]'', ''[[yjcD]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU11810 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU11810 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU11810 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:yjcC_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yjcC_context.gif]] | ||
Revision as of 12:34, 13 May 2013
- Description: required for spore coat assembly and resistance
| Gene name | spoVIF |
| Synonyms | yjcC |
| Essential | no |
| Product | unknown |
| Function | required for spore coat assembly and resistance |
| Gene expression levels in SubtiExpress: spoVIF | |
| MW, pI | 11 kDa, 10.201 |
| Gene length, protein length | 300 bp, 100 aa |
| Immediate neighbours | yjcZ, yjcD |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU11810
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cytoplasm (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: O31625
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: spoVIF PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Giuseppina Cangiano, Antonio Mazzone, Loredana Baccigalupi, Rachele Isticato, Patrick Eichenberger, Maurilio De Felice, Ezio Ricca
Direct and indirect control of late sporulation genes by GerR of Bacillus subtilis.
J Bacteriol: 2010, 192(13);3406-13
[PubMed:20435725]
[WorldCat.org]
[DOI]
(I p)
Ritsuko Kuwana, Satoko Yamamura, Hiromi Ikejiri, Kazuo Kobayashi, Naotake Ogasawara, Kei Asai, Yoshito Sadaie, Hiromu Takamatsu, Kazuhito Watabe
Bacillus subtilis spoVIF (yjcC) gene, involved in coat assembly and spore resistance.
Microbiology (Reading): 2003, 149(Pt 10);3011-3021
[PubMed:14523132]
[WorldCat.org]
[DOI]
(P p)
