Difference between revisions of "YfhL"
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|style="background:#ABCDEF;" align="center"|'''Function''' || | |style="background:#ABCDEF;" align="center"|'''Function''' || | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU08580 yfhL] |
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 11 kDa, 11.025 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 11 kDa, 11.025 | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yfhK]]'', ''[[yfhM]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yfhK]]'', ''[[yfhM]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU08580 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU08580 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU08580 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:yfhL_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yfhL_context.gif]] | ||
Revision as of 12:23, 13 May 2013
- Description: general stress protein, important for survival at low temperature (4°C) and during ethanol stress
| Gene name | yfhL |
| Synonyms | |
| Essential | no |
| Product | resistence protein (against toxic peptide SdpC) |
| Function | |
| Gene expression levels in SubtiExpress: yfhL | |
| MW, pI | 11 kDa, 11.025 |
| Gene length, protein length | 330 bp, 110 aa |
| Immediate neighbours | yfhK, yfhM |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
general stress proteins (controlled by SigB), cell envelope stress proteins (controlled by SigM, V, W, X, Y), resistance against toxins/ antibiotics, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU08580
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cell membrane (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: O31580
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Bronwyn G Butcher, John D Helmann
Identification of Bacillus subtilis sigma-dependent genes that provide intrinsic resistance to antimicrobial compounds produced by Bacilli.
Mol Microbiol: 2006, 60(3);765-82
[PubMed:16629676]
[WorldCat.org]
[DOI]
(P p)
Dirk Höper, Uwe Völker, Michael Hecker
Comprehensive characterization of the contribution of individual SigB-dependent general stress genes to stress resistance of Bacillus subtilis.
J Bacteriol: 2005, 187(8);2810-26
[PubMed:15805528]
[WorldCat.org]
[DOI]
(P p)
H Antelmann, C Scharf, M Hecker
Phosphate starvation-inducible proteins of Bacillus subtilis: proteomics and transcriptional analysis.
J Bacteriol: 2000, 182(16);4478-90
[PubMed:10913081]
[WorldCat.org]
[DOI]
(P p)
X Huang, A Gaballa, M Cao, J D Helmann
Identification of target promoters for the Bacillus subtilis extracytoplasmic function sigma factor, sigma W.
Mol Microbiol: 1999, 31(1);361-71
[PubMed:9987136]
[WorldCat.org]
[DOI]
(P p)
