Difference between revisions of "Int"
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|style="background:#ABCDEF;" align="center"|'''Function''' || excision of the conjugative transposon <br/>ICEBs1 from the trnS-leu2 locus | |style="background:#ABCDEF;" align="center"|'''Function''' || excision of the conjugative transposon <br/>ICEBs1 from the trnS-leu2 locus | ||
|- | |- | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU04800 int] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 43 kDa, 9.764 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 43 kDa, 9.764 | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[trnS-Leu2]]'', ''[[immA]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[trnS-Leu2]]'', ''[[immA]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU04800 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU04800 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU04800 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:ydcL_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:ydcL_context.gif]] | ||
Revision as of 12:12, 13 May 2013
- Description: integrase
| Gene name | int |
| Synonyms | ydcL |
| Essential | no |
| Product | integrase |
| Function | excision of the conjugative transposon ICEBs1 from the trnS-leu2 locus |
| Gene expression levels in SubtiExpress: int | |
| MW, pI | 43 kDa, 9.764 |
| Gene length, protein length | 1104 bp, 368 aa |
| Immediate neighbours | trnS-Leu2, immA |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
[None Expression at a glance] PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU04800
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: 'phage' integrase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P96629
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Catherine A Lee, Jennifer M Auchtung, Rita E Monson, Alan D Grossman
Identification and characterization of int (integrase), xis (excisionase) and chromosomal attachment sites of the integrative and conjugative element ICEBs1 of Bacillus subtilis.
Mol Microbiol: 2007, 66(6);1356-69
[PubMed:18005101]
[WorldCat.org]
[DOI]
(P p)
