Difference between revisions of "YclD"
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|style="background:#ABCDEF;" align="center"|'''Function''' || resistance to salicylic acid | |style="background:#ABCDEF;" align="center"|'''Function''' || resistance to salicylic acid | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU03652 yclD] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 18 kDa, 7.667 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 18 kDa, 7.667 | ||
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[bsdD]]'', ''[[yclE]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[bsdD]]'', ''[[yclE]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU03652 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU03652 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU03652 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:yclD_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yclD_context.gif]] | ||
Revision as of 12:08, 13 May 2013
- Description: putative FMN-binding subunit of phenolic acid decarboxylase
| Gene name | yclD |
| Synonyms | |
| Essential | no |
| Product | putative phenolic acid decarboxylase subunit |
| Function | resistance to salicylic acid |
| Gene expression levels in SubtiExpress: yclD | |
| MW, pI | 18 kDa, 7.667 |
| Gene length, protein length | 462 bp, 154 aa |
| Immediate neighbours | bsdD, yclE |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
resistance against other toxic compounds (nitric oxide, phenolic acids, flavonoids, oxalate)
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU03652
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: C0SPB5
- KEGG entry: BSU03650
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Boguslaw Lupa, Delina Lyon, Moreland D Gibbs, Rosalind A Reeves, Juergen Wiegel
Distribution of genes encoding the microbial non-oxidative reversible hydroxyarylic acid decarboxylases/phenol carboxylases.
Genomics: 2005, 86(3);342-51
[PubMed:15979273]
[WorldCat.org]
[DOI]
(P p)
