Difference between revisions of "NasF"
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|style="background:#ABCDEF;" align="center"|'''Function''' || nitrate respiration | |style="background:#ABCDEF;" align="center"|'''Function''' || nitrate respiration | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU03280 nasF] |
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/other_nitrogen_sources/index.html Alternative nitrogen sources]''' | |colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/other_nitrogen_sources/index.html Alternative nitrogen sources]''' | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ycgT]]'', ''[[nasE]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ycgT]]'', ''[[nasE]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU03280 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU03280 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU03280 Advanced_DNA] |
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|colspan="2" | '''Genetic context''' <br/> [[Image:nasF_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:nasF_context.gif]] | ||
Revision as of 12:06, 13 May 2013
- Description: uroporphyrinogen methyltransferase
| Gene name | nasF |
| Synonyms | nasBE |
| Essential | no |
| Product | uroporphyrinogen methyltransferase |
| Function | nitrate respiration |
| Gene expression levels in SubtiExpress: nasF | |
| Metabolic function and regulation of this protein in SubtiPathways: Alternative nitrogen sources | |
| MW, pI | 53 kDa, 6.523 |
| Gene length, protein length | 1449 bp, 483 aa |
| Immediate neighbours | ycgT, nasE |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
respiration, utilization of nitrogen sources other than amino acids
This gene is a member of the following regulons
Fur regulon, NsrR regulon, ResD regulon, TnrA regulon
The gene
Basic information
- Locus tag: BSU03280
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: S-adenosyl-L-methionine + uroporphyrinogen III = S-adenosyl-L-homocysteine + precorrin-1 (according to Swiss-Prot)
- Protein family: precorrin methyltransferase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P42437
- KEGG entry: [3]
- E.C. number: 2.1.1.107
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Reviews
Víctor M Luque-Almagro, Andrew J Gates, Conrado Moreno-Vivián, Stuart J Ferguson, David J Richardson, M Dolores Roldán
Bacterial nitrate assimilation: gene distribution and regulation.
Biochem Soc Trans: 2011, 39(6);1838-43
[PubMed:22103536]
[WorldCat.org]
[DOI]
(I p)
Original publications
