Difference between revisions of "CwlK"
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|style="background:#ABCDEF;" align="center"|'''Function''' || cell wall turnover | |style="background:#ABCDEF;" align="center"|'''Function''' || cell wall turnover | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU02810 cwlK] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 18 kDa, 5.66 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 18 kDa, 5.66 | ||
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ycdC]]'', ''[[rapJ]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ycdC]]'', ''[[rapJ]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU02810 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU02810 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU02810 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:ycdD_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:ycdD_context.gif]] | ||
Revision as of 12:04, 13 May 2013
- Description: peptidoglycan hydrolytic L,D-endopeptidase
| Gene name | cwlK |
| Synonyms | ycdD |
| Essential | no |
| Product | peptidoglycan hydrolytic L,D-endopeptidase |
| Function | cell wall turnover |
| Gene expression levels in SubtiExpress: cwlK | |
| MW, pI | 18 kDa, 5.66 |
| Gene length, protein length | 501 bp, 167 aa |
| Immediate neighbours | ycdC, rapJ |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
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Contents
Categories containing this gene/protein
cell wall degradation/ turnover, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU02810
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: peptidase M15C family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cell membrane PubMed
Database entries
- Structure:
- UniProt: O34360
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Ciaran Condon, IBPC, Paris, France Homepage
Your additional remarks
References
Tatsuya Fukushima, Yang Yao, Toshihiko Kitajima, Hiroki Yamamoto, Junichi Sekiguchi
Characterization of new L,D-endopeptidase gene product CwlK (previous YcdD) that hydrolyzes peptidoglycan in Bacillus subtilis.
Mol Genet Genomics: 2007, 278(4);371-83
[PubMed:17588176]
[WorldCat.org]
[DOI]
(P p)
