Difference between revisions of "YojA"

From SubtiWiki
Jump to: navigation, search
Line 35: Line 35:
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
 
 
 
<br/><br/>
 
<br/><br/>
  
Line 89: Line 85:
 
* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
  
* '''Interactions:'''
+
* '''[[SubtInteract|Interactions]]:'''  
  
* '''Localization:''' membrane (according to Swiss-Prot)
+
* '''[[Localization]]:'''
 +
** membrane (according to Swiss-Prot)
  
 
=== Database entries ===
 
=== Database entries ===
Line 111: Line 108:
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yojA_2124850_2126184_-1 yojA] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yojA_2124850_2126184_-1 yojA] {{PubMed|22383849}}
  
* '''Sigma factor:'''  
+
* '''[[Sigma factor]]:'''  
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 19:12, 25 March 2013

  • Description: similar to gluconate permease

Gene name yojA
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yojA
MW, pI 46 kDa, 9.344
Gene length, protein length 1332 bp, 444 aa
Immediate neighbours yojB, yodA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YojA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YojA expression.png















Categories containing this gene/protein

transporters/ other, membrane proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU19520

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s): GntP

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References