Difference between revisions of "YodQ"

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* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
  
* '''Interactions:'''
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* '''[[SubtInteract|Interactions]]:'''  
  
* '''Localization:'''
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* '''[[Localization]]:'''
  
 
=== Database entries ===
 
=== Database entries ===
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yodQ_2141703_2143013_-1 yodQ] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yodQ_2141703_2143013_-1 yodQ] {{PubMed|22383849}}
  
* '''Sigma factor:''' [[SigE]] {{PubMed|14523133}}
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* '''[[Sigma factor]]:''' [[SigE]] {{PubMed|14523133}}
  
 
* '''Regulation:''' expressed early during sporuation in the mother cell ([[SigE]]) {{PubMed|14523133}}
 
* '''Regulation:''' expressed early during sporuation in the mother cell ([[SigE]]) {{PubMed|14523133}}

Revision as of 21:21, 15 March 2013

  • Description: putative deacylase

Gene name yodQ
Synonyms argE
Essential no
Product putative deacylase
Function unknown
Gene expression levels in SubtiExpress: yodQ
MW, pI 48 kDa, 5.408
Gene length, protein length 1308 bp, 436 aa
Immediate neighbours yodP, yodR
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YodQ context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YodQ expression.png















Categories containing this gene/protein

sporulation proteins, poorly characterized/ putative enzymes

This gene is a member of the following regulons

SigE regulon


The gene

Basic information

  • Locus tag: BSU19710

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s): YlmB

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation: expressed early during sporuation in the mother cell (SigE) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Andrea Feucht, Louise Evans, Jeff Errington
Identification of sporulation genes by genome-wide analysis of the sigmaE regulon of Bacillus subtilis.
Microbiology (Reading): 2003, 149(Pt 10);3023-3034
[PubMed:14523133] [WorldCat.org] [DOI] (P p)