PrkD

• Description: protein kinase D
  
  

Gene name	prkD
Synonyms	ybdM
Essential	no
Product	protein kinase D
Function	unknown
Gene expression levels in SubtiExpress: prkD
MW, pI	29 kDa, 6.359
Gene length, protein length	768 bp, 256 aa
Immediate neighbours	ybzI, ybdN
Get the DNA and protein sequences (Barbe et al., 2009)
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed

Categories containing this gene/protein

protein modification, phosphoproteins

The gene

Basic information

• Locus tag: BSU02030

Database entries

• DBTBS entry: no entry

• SubtiList entry: [1]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:
  • ATP + a protein = ADP + a phosphoprotein (according to Swiss-Prot)
  • phosphorylates DegS on Ser-76 (in vitro) PubMed

• Protein family: protein kinase domain (according to Swiss-Prot)

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains:

• Modification: autophosphorylated on Thr-174 (in vitro) PubMed

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:

Database entries

• Structure:

• UniProt: O31435

• KEGG entry: [2]

• E.C. number: 2.7.11.1

Expression and regulation

• Operon:

• Expression browser: prkD PubMed

• Sigma factor:

• Regulation:

• Regulatory mechanism:

• Additional information:

Biological materials

• Mutant: GP578 (aphA3), available in the Stülke lab

• Expression vector:
  • pGP390 (N-terminal Strep-tag, purification from B. subtilis, for SPINE, in pGP380), available in Stülke lab
  • for expression, purification in E. coli with N-terminal Strep-tag, in pGP172: pGP821, available in Stülke lab
  • for expression, purification in E. coli with N-terminal His-tag, in pWH844: pGP1407, available in Stülke lab

• lacZ fusion: pGP830 (in pAC7), available in Stülke lab

• GFP fusion:

• two-hybrid system:

• Antibody: