Difference between revisions of "SscA"
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU09958 sscA] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU09958 sscA] | ||
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| − | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 2.98 kDa, 5. | + | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 2.98 kDa, 5.274 |
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| − | |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || | + | |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 84 bp, 28 aa |
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[prsA]]'', ''[[yhaJ]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[prsA]]'', ''[[yhaJ]]'' | ||
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=== Basic information === | === Basic information === | ||
| − | * '''Locus tag:''' | + | * '''Locus tag:''' BSU09958 |
===Phenotypes of a mutant === | ===Phenotypes of a mutant === | ||
Revision as of 08:27, 13 November 2012
- Description: small spore protein
| Gene name | sscA |
| Synonyms | yhzE |
| Essential | no |
| Product | small spore protein |
| Function | spore coat assembly |
| Gene expression levels in SubtiExpress: sscA | |
| MW, pI | 2.98 kDa, 5.274 |
| Gene length, protein length | 84 bp, 28 aa |
| Immediate neighbours | prsA, yhaJ |
| Gene sequence (+200bp) | Protein sequence |
| Genetic context File:YhzE context.gif | |
| [None Expression at a glance] PubMed 500px | |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU09958
Phenotypes of a mutant
- poor germination
Database entries
- DBTBS entry: no entry
- SubtiList entry: no entry
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: C0H3Y2
- KEGG entry:
- E.C. number:
Additional information
Expression and regulation
- Operon: sscA PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Takeko Kodama, Takeshi Matsubayashi, Tadayoshi Yanagihara, Hiroyuki Komoto, Katsutoshi Ara, Katsuya Ozaki, Ritsuko Kuwana, Daisuke Imamura, Hiromu Takamatsu, Kazuhito Watabe, Junichi Sekiguchi
A novel small protein of Bacillus subtilis involved in spore germination and spore coat assembly.
Biosci Biotechnol Biochem: 2011, 75(6);1119-28
[PubMed:21670523]
[WorldCat.org]
[DOI]
(I p)
Elizabeth M Fozo, Kira S Makarova, Svetlana A Shabalina, Natalya Yutin, Eugene V Koonin, Gisela Storz
Abundance of type I toxin-antitoxin systems in bacteria: searches for new candidates and discovery of novel families.
Nucleic Acids Res: 2010, 38(11);3743-59
[PubMed:20156992]
[WorldCat.org]
[DOI]
(I p)
