Difference between revisions of "RnpB"
| Line 8: | Line 8: | ||
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''rnaP '' | |style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''rnaP '' | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"| '''Essential''' || | + | |style="background:#ABCDEF;" align="center"| '''Essential''' || yes {{PubMed|23109554}} |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''Product''' || RNA component of ribonuclease P <br/>([[RNase]] P) (catalytic subunit, ribozyme) | |style="background:#ABCDEF;" align="center"| '''Product''' || RNA component of ribonuclease P <br/>([[RNase]] P) (catalytic subunit, ribozyme) | ||
| Line 35: | Line 35: | ||
{{SubtiWiki category|[[Rnases]]}}, | {{SubtiWiki category|[[Rnases]]}}, | ||
{{SubtiWiki category|[[translation]]}}, | {{SubtiWiki category|[[translation]]}}, | ||
| − | {{SubtiWiki category|[[ncRNA]]}} | + | {{SubtiWiki category|[[ncRNA]]}}, |
| + | {{SubtiWiki category|[[essential genes]]}} | ||
= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
| Line 47: | Line 48: | ||
===Phenotypes of a mutant === | ===Phenotypes of a mutant === | ||
| − | + | * essential {{PubMed|23109554}} | |
=== Database entries === | === Database entries === | ||
| Line 108: | Line 109: | ||
==Original Publications== | ==Original Publications== | ||
| − | '''Additional publications:''' {{PubMed|21076397,21622899}} | + | '''Additional publications:''' {{PubMed|23109554,21076397,21622899}} |
<pubmed>16470227,17355991,11812129,10390342,11454206, 19549719,11454206, 19717440 ,20133747 19932118 20188108 20434461 17299131 14510496 12951523 12836338 11577704 20557101 </pubmed> | <pubmed>16470227,17355991,11812129,10390342,11454206, 19549719,11454206, 19717440 ,20133747 19932118 20188108 20434461 17299131 14510496 12951523 12836338 11577704 20557101 </pubmed> | ||
[[Category:small RNA]] | [[Category:small RNA]] | ||
Revision as of 13:12, 31 October 2012
- Description: RNA component of RNase P
| Gene name | rnpB |
| Synonyms | rnaP |
| Essential | yes PubMed |
| Product | RNA component of ribonuclease P (RNase P) (catalytic subunit, ribozyme) |
| Function | cleavage of precursor sequences from the 5' ends of pre-tRNAs |
| Interactions involving this RNA in SubtInteract: RnpB | |
| Gene length | 401 bp |
| Immediate neighbours | ypsC, ypsB |
| Gene sequence (+200bp) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
Categories containing this gene/protein
Rnases, translation, ncRNA, essential genes
This gene is a member of the following regulons
The gene
Basic information
- Locus tag:
Phenotypes of a mutant
- essential PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
- Structure:
The RNA
- Biological activity: 5' end maturation of precursor tRNAs
- RNA family:
- cofactor: divalent cations (Ca(II) or Mg (II)) for the stabilization of the complex with pre-tRNA PubMed
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/RNA
- Carol Fierke, University of Michigan, Ann Arbor, USA homepage
- Roland Hartmann, Marburg University, Germany homepage
Your additional remarks
References
Reviews
Original Publications
Additional publications: PubMed
