Difference between revisions of "TsaB"
Raphael2215 (talk | contribs) |
|||
| Line 1: | Line 1: | ||
| − | * '''Description:''' | + | * '''Description:''' cofactor of the [[Gcp]] tRNA modification enzyme <br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
|- | |- | ||
| Line 36: | Line 36: | ||
<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
| − | |||
| − | |||
| − | |||
| − | |||
<br/><br/> | <br/><br/> | ||
= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
{{SubtiWiki category|[[essential genes]]}}, | {{SubtiWiki category|[[essential genes]]}}, | ||
| − | {{SubtiWiki category|[[ | + | {{SubtiWiki category|[[translation]]}} |
= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
| Line 66: | Line 62: | ||
=== Additional information=== | === Additional information=== | ||
| − | |||
| − | |||
| Line 94: | Line 88: | ||
* '''[[SubtInteract|Interactions]]:''' | * '''[[SubtInteract|Interactions]]:''' | ||
** the corresponding ''E. coli'' protein interacts with the proteins corresponding to [[YdiB]] and [[Gcp]] [http://www.ncbi.nlm.nih.gov/sites/entrez/19376873 PubMed] | ** the corresponding ''E. coli'' protein interacts with the proteins corresponding to [[YdiB]] and [[Gcp]] [http://www.ncbi.nlm.nih.gov/sites/entrez/19376873 PubMed] | ||
| + | ** [[Gcp]]-[[YdiC]] {{PubMed|21285948}} | ||
* '''[[Localization]]:''' | * '''[[Localization]]:''' | ||
Revision as of 16:15, 28 August 2012
- Description: cofactor of the Gcp tRNA modification enzyme
| Gene name | ydiC |
| Synonyms | |
| Essential | yes PubMed |
| Product | unknown |
| Function | unknown |
| Gene expression levels in SubtiExpress: ydiC | |
| Interactions involving this protein in SubtInteract: YdiC | |
| MW, pI | 25 kDa, 5.762 |
| Gene length, protein length | 687 bp, 229 aa |
| Immediate neighbours | ydiB, ydiD |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU05920
Phenotypes of a mutant
essential PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: the corresponding E. coli protein is involved in proteolysis of the Gcp homolog PubMed
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: O05516
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
